MUTASI STRUCTURAL INTRON trnL (UAA) PADA SUKU MERANTI-MERANTIAN (DIPTEROCARPACEAE)


Abstract
Keywords
Full Text:
PDFReferences
AokiK, T Suzuki and N Murakami. 2003. Intraspecific sequence variation of chloroplast DNA among the component species of evergreen broad-leaved forests in Japan. Journal of Plant Research 116(4), 337-44.
Ashton PS. 1982. Dipterocarpaceae. Flora Malesiana Series I-Spermatophyta Flowering Plants 9(2), 237-552.
Bayer, RJB, CF Puttock and SA Kelchner. 2000. Phylogeny of South African Gnaphalieae (Asteraceae) based on two-coding sequences. American Journal of Botany 87,259-272.
Borsch T, KW Hilu, D Quandt, V Wilde, C Neinhuis and W Barthlott. 2003. Noncoding plastid trnltrnV sequences reveal a well resolved phylogeny of basal angiosperms. Journal of Evolutionary Biology 16(4), 558-576.
Cech TR, SH Damberger and RR Gutell. 1994. Representation of the secondary structure and tertiary structure of group I intron. Nat. Struc. Biol. I, 273-280.
Davis CC, CD Bell, PW Fritsch and S Mathews S. 2002. Phylogeny of Acridocarpus brachylophon (Malpighiaceae): Implications for tertiary tropical floras and Afroasian biogeography. Evolution 56(12), 2395-2405.
Gamage DT, MP Silva, N Inomata.T Yamazaki and AE Szmidt.2006. Comprehensive molecular phylogeny of the sub-family dipterocarpoideae (dipterocarpaceae) based on chloroplast DNA sequences. Genes Genet. Syst. 81(1), 1-12.
Hamilton MB, JM Braverman and DF Soria-Hernanz. 2003. Patterns and Relative Rates of Nucleotide and Insertion/Deletion Evolution at Six Chloroplast Intergenic Regions in New World Species of the Lecythidaceae. Molecular Biology & Evolution. 20(10), 1710-1721.
Kelchner SA. 2002. Group II introns as phylogenetic tool: structure, function and evolutionary constraints. American Journal of Botany 89(10), 1651-1669.
Kim AK, DJ Ellis, HA Sandier, P Hart, JE Darga, D Keeney and TA Bewick. 2004. Genetic diversity of Dodder (Cuscuta spp.) collected from commercial cranberries production as reveal in the trnL (UAA) intron. Plant Molecular Biology Reporter 22, 217-223.
Kuhsel MG, R Strickland, and JD Palmer. 1990. An ancient group I intron shared by eubacteria and chloroplasts. Science 250,1570-1573.
Maury-Lechon G 1979. Consequences taxonomiques de l'etude des caracteres des fruits/germination, embryons et plantules des Dipterocarpacees. In: Maury-Lechon G (Ed), Dipterocarpacees: Taxonomie-Phylogenie-Ecologie, Memoires du Museum National d'Histoire Naturelle: First International Round Table on Dipterocarpaceae, 81 -106. Serie B, Botanique 26, Edition du Museum, Paris.
Maury-Lechon G and L Curtet. 1998. Biogeography and evolutionary systematics of Dipterocarpaceae. In: A Review of Dipterocarps taxonomy, ecology and silviculture. S Appanah and JM Turnbull (Eds.), 5- 44. CIFOR, Bogor.
Meijer W and GHS Wood. 1964. Dipterocarps of Sabah (North Borneo). In: Forest Department Sandakan (Ed.) Sabah Forest Record No. 5, 1 -344.
Meijer Wand GHS Wood. 1976. Keys to Dipterocarps of Sabah. BIOTROP, Bogor.
Koch MA, C Dobes, M Matschinger, W Bleeker, J Vogel, M Kiefer, and T Mitchell-Olds. 2005. Evolution of the trriP (GAA) Gene in Arabidopsis Relatives and the Brassicaceae Family: Monophyletic Origin and Subsequent Diversification of a Plastidic Pseudogene. Molecular Biology & Evolution 22(4), 1032-1043.
Kostermans AJGH. 1978. Pakaramaea dipterocarpacea Maguire and Ashton belongs to Tiliaceae and not to Dipterocarpaceae. Taxon 27, 357-359.
Kostermans AJGH. 1985. Family status for the Monotoideae and the Pakaramoideae, Dipterocarpaceae. Taxon 34, 426-435.
Kostermans AJGH. 1989. Monotaceae, a new family allied to Tiliaceae. Taxon38,123-124.
Kostermans AJGH. 1992. A handbook of the Dipterocarpaceae of Sri Lanka. Wildlife Heritage Trust of Sri Lanka. 244p.
Oksanen I, Lohtander K, Sivanen K and Rikkinen J. 2004. Repeat-type distribution in trnL intron does not correspond with species phylogeny: comparison of the generic markers 16S rRNA and trnL intron in heterocystous cyanobacteria. International Journal of Systematic and Evolutionary Microbiology 54,765- 772.
Symington CF. 1943. Foresters'Manual of the Dipterocarps. Forest Department, Kuala Lumpur. Tarbelet P, L Gielly, G Patou and J Bouvet. 1991. Universal primers for amplification three non coding regions of chloroplast DNA. Plant Molecular Biology 17,1105-1109.
Tarbelet P, E Coissac, F Pompanon, L Gielly, C Miquel, A Valentini, T Vermat, G Corthier, C Brochman and E Willerslev. 2007. Power and limitation of the chloroplast trnL (UAA) Intron for plant DNA barcoding. Nucleic Acid Research 35(3), 1-8.
Thompson JD, DG Higgins and TJ Gibson. 1994. CLUSTAL W: improving the sensitivity of pregressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acid Research 22, 4673-4680.
Tsumura Y, T Kawahara, R Wickneswari and Y Yoshimura. 1996. Molecular Phylogeny of Dipterocarpaceae in South East Asia using RFLP PCR-amplified chloroplast genes. Theoritical and Applied Genetics 93 (1-2), 22-29.
Yulita KS, RJ Bayer and JG West. 2005. Molecular phylogenetic study of Hopea and Shorea (Dipterocarpaceae): Evidence from the trnL-V and internal transcribes spacers region. Plant Species Biology 20,167-182.
Zimmer EA, EH Roalson, LE Skog, JK Boggan and A Idnurm.2002. Phyiogenetic relationships in the Gesnerioideae (Gesneriaceae) based on nrDNA ITS and cpDNA trriL-Y and trnE-T spacer region sequences. American Journal of Botany 89(2), 296-311.
Refbacks
- There are currently no refbacks.